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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CCDC38 ENSG00000165972

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Description

coiled-coil domain containing 38 [Source:HGNC Symbol;Acc:26843]

Gene Synonyms

FLJ40089

Location

Chromosome 12: 96,260,826-96,336,752 reverse strand.

GRCh37:CM000674.1

About this gene

This gene has 8 transcripts (splice variants) and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000546386.1	CCDC38-002	2599	13aa	ENSP00000448644.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000344280.3	CCDC38-001	2277	563aa	ENSP00000345470.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9056	F8VY05 Q502W7	NM_182496.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000546947.1	CCDC38-006	559	62aa	ENSP00000449001.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VY05	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000546803.1	CCDC38-004	511	47aa	ENSP00000447966.1	Nonsense mediated decay		F8VTU7	-	-
ENST00000549876.1	CCDC38-008	499	90aa	ENSP00000447129.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000549752.1	CCDC38-005	476	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000548771.1	CCDC38-007	470	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000546816.1	CCDC38-009	465	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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