Description
Rap guanine nucleotide exchange factor (GEF) 6 [Source:HGNC Symbol;Acc:20655]
Gene Synonyms
KIA001LB, PDZ-GEF2, PDZGEF2, RA-GEF-2, RAGEF2
Location
Chromosome 5: 130,759,614-130,970,929 reverse strand.
GRCh37:CM000667.1
About this gene
This gene has 15 transcripts (splice variants) and 9 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000509018.1 | RAPGEF6-001 | 8357 | 1601aa | ENSP00000421684.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS34225 | D6RB02 Q8TEU7 | NM_016340.5 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000307984.5 | RAPGEF6-201 | 8079 | 1509aa | ENSP00000309298.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54901 | D6RB02 Q8TEU7 | NM_001164387.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000507093.1 | RAPGEF6-003 | 5727 | 1504aa | ENSP00000426081.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54899 | D6RB02 Q8TEU7 | NM_001164388.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000296859.6 | RAPGEF6-006 | 5618 | 1609aa | ENSP00000296859.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54900 | D6RB02 Q8TEU7 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000308008.6 | RAPGEF6-004 | 4176 | 1391aa | ENSP00000311419.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54898 | D6RB02 Q8TEU7 | NM_001164389.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000512052.1 | RAPGEF6-005 | 3535 | 1114aa | ENSP00000426910.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RE77 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000510071.1 | RAPGEF6-008 | 3107 | 827aa | ENSP00000425389.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS54897 | D6RB02 Q8TEU7 | NM_001164390.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000513227.1 | RAPGEF6-012 | 560 | 155aa | ENSP00000424574.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RB02 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000504575.1 | RAPGEF6-013 | 552 | 155aa | ENSP00000425891.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RD23 D6RIH0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000504039.1 | RAPGEF6-014 | 542 | 149aa | ENSP00000427102.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | D6RD23 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000515170.1 | RAPGEF6-002 | 4103 | 1204aa | ENSP00000425772.1 | Nonsense mediated decay | B7Z7Y1 D6RB02 | - | - | |
| ENST00000503398.2 | RAPGEF6-010 | 149 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000512611.1 | RAPGEF6-007 | 3683 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000514179.1 | RAPGEF6-009 | 2200 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000504919.1 | RAPGEF6-011 | 581 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
