Description
CCR4-NOT transcription complex, subunit 1 [Source:HGNC Symbol;Acc:7877]
Gene Synonyms
AD-005, CDC39, KIAA1007, NOT1, NOT1H
Location
Chromosome 16: 58,553,855-58,663,790 reverse strand.
GRCh37:CM000678.1
About this gene
This gene has 23 transcripts (splice variants) and is associated with 5 phenotypes.
Transcripts
Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|---|
ENST00000317147.5 | CNOT1-001 | 8471 | 2376aa | ENSP00000320949.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS10799 | A5YKK6 B3KS60 B7Z6X2 H3BPF1 H3BT18 H3BUY8 | NM_016284.4 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000569240.1 | CNOT1-003 | 7660 | 2371aa | ENSP00000455635.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58468 | A5YKK6 B3KS60 B7Z6X2 H3BPF1 H3BT18 H3BUY8 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000441024.2 | CNOT1-002 | 4999 | 1551aa | ENSP00000413113.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS45501 | A5YKK6 H3BPF1 H3BT18 H3BUY8 | NM_206999.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
ENST00000245138.4 | CNOT1-201 | 4098 | 1227aa | ENSP00000245138.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B3KS60 B5MDN3 B7Z6X2 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
ENST00000568917.1 | CNOT1-019 | 1317 | 439aa | ENSP00000454611.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BMZ2 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
ENST00000569882.1 | CNOT1-023 | 831 | 277aa | ENSP00000454377.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BMH0 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
ENST00000567285.1 | CNOT1-016 | 722 | 241aa | ENSP00000458057.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
ENST00000564557.1 | CNOT1-010 | 582 | 62aa | ENSP00000456975.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BPF1 H3BT18 H3BUY8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000562046.1 | CNOT1-022 | 578 | 193aa | ENSP00000456131.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
ENST00000567133.1 | CNOT1-017 | 553 | 185aa | ENSP00000454763.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
ENST00000569020.1 | CNOT1-008 | 535 | 25aa | ENSP00000457869.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BUY8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000565697.1 | CNOT1-007 | 385 | 25aa | ENSP00000455289.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H3BPF1 H3BUY8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
ENST00000567188.1 | CNOT1-005 | 7830 | 2150aa | ENSP00000456649.1 | Nonsense mediated decay | A5YKK6 H3BPF1 H3BT18 H3BUY8 | - | - | |
ENST00000565605.1 | CNOT1-020 | 739 | 96aa | ENSP00000457460.1 | Nonsense mediated decay | H3BPF1 H3BT18 H3BU44 H3BUY8 | - | - | |
ENST00000566240.1 | CNOT1-018 | 567 | 68aa | ENSP00000457173.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
ENST00000569732.1 | CNOT1-015 | 906 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000568158.1 | CNOT1-009 | 496 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000569263.1 | CNOT1-006 | 304 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
ENST00000563130.1 | CNOT1-004 | 2280 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000569916.1 | CNOT1-011 | 599 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000563283.1 | CNOT1-012 | 551 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000569924.1 | CNOT1-014 | 493 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
ENST00000570139.1 | CNOT1-013 | 458 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |