Description
glucocorticoid induced transcript 1 [Source:HGNC Symbol;Acc:18713]
Gene Synonyms
FAM117C, GCTR, GIG18, TSSN1
Location
Chromosome 7: 8,008,425-8,133,902 forward strand.
GRCh37:CM000669.1
About this gene
This gene has 12 transcripts (splice variants), 2 paralogues and is associated with 1 phenotype.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000223145.5 | GLCCI1-001 | 4743 | 547aa | ENSP00000223145.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS34601 | Q86VQ1 | NM_138426.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000430798.1 | GLCCI1-009 | 581 | 193aa | ENSP00000396171.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H7C0Q2 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000414914.1 | GLCCI1-008 | 575 | 191aa | ENSP00000406569.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H7C2L5 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000438949.1 | GLCCI1-010 | 873 | 191aa | ENSP00000393942.1 | Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000474269.1 | GLCCI1-005 | 691 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000470583.1 | GLCCI1-004 | 555 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000496617.2 | GLCCI1-011 | 538 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000482540.1 | GLCCI1-002 | 3942 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000489405.1 | GLCCI1-003 | 1475 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000492797.1 | GLCCI1-007 | 495 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000491947.1 | GLCCI1-012 | 427 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000460897.1 | GLCCI1-006 | 412 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
