Gene: SYP ENSG00000102003

Description

synaptophysin [Source:HGNC Symbol;Acc:11506]

Gene Synonyms

MRXSYP

Location

Chromosome X: 49,044,269-49,056,718 reverse strand.

GRCh37:CM000685.1

View alleles of this gene on alternative sequences

About this gene

This gene has 9 transcripts (splice variants), 1 gene allele, 3 paralogues and is associated with 4 phenotypes.

Transcripts

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Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000263233.4	SYP-001	2486	313aa	ENSP00000263233.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14321	B7Z359 P08247	NM_003179.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000479808.1	SYP-004	1850	313aa	ENSP00000418169.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14321	B7Z359 P08247	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538567.1	SYP-201	870	195aa	ENSP00000437456.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z359	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000472598.1	SYP-002	761	203aa	ENSP00000418387.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000376303.2	SYP-003	858	40aa	ENSP00000365480.2	Nonsense mediated decay		G5E9A2	-	-
ENST00000469389.1	SYP-009	581	118aa	ENSP00000418987.1	Nonsense mediated decay		F2Z3E1	-	-
ENST00000466635.1	SYP-008	513	118aa	ENSP00000420774.1	Nonsense mediated decay		F2Z3E1	-	-
ENST00000494396.1	SYP-005	2062	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000472737.1	SYP-007	574	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Gene: SYP ENSG00000102003

Summary