Loading…

Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: LNX1 ENSG00000072201

.

Description

ligand of numb-protein X 1, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:6657]

Gene Synonyms

LNX, MPDZ, PDZRN2

Location

Chromosome 4: 54,325,468-54,567,572 reverse strand.

GRCh37:CM000666.1

About this gene

This gene has 9 transcripts (splice variants) and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000306888.2	LNX1-002	3757	632aa	ENSP00000302879.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3492	Q8TBB1	NM_032622.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000263925.7	LNX1-001	2953	728aa	ENSP00000263925.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47057	D6RAH9 D6RB76 Q8TBB1	NM_001126328.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000513421.1	LNX1-006	1024	125aa	ENSP00000426445.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RAH9 D6RB76 Q8TBB1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000510143.1	LNX1-007	731	99aa	ENSP00000421897.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RAH9 D6RB76	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000512247.1	LNX1-003	603	90aa	ENSP00000424364.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RB76	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000507168.1	LNX1-008	572	16aa	ENSP00000425135.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000504299.1	LNX1-004	556	6aa	ENSP00000423344.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000504605.1	LNX1-005	570	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000511398.1	LNX1-010	622	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

.

Summary

.

.