Description
contactin 1 [Source:HGNC Symbol;Acc:2171]
Gene Synonyms
F3, GP135
Location
Chromosome 12: 41,086,244-41,466,220 forward strand.
GRCh37:CM000674.1
About this gene
This gene has 12 transcripts (splice variants), 17 paralogues and is associated with 2 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000551295.2 | CNTN1-001 | 5557 | 1018aa | ENSP00000447006.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8737 | F8VQW3 F8VUI8 F8VUI9 F8VX96 Q12860 | NM_001843.3 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000347616.1 | CNTN1-201 | 3393 | 1018aa | ENSP00000325660.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8737 | F8VQW3 F8VUI8 F8VUI9 F8VX96 Q12860 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000348761.2 | CNTN1-002 | 3328 | 1007aa | ENSP00000261160.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8738 | Q12860 | NM_175038.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000547849.1 | CNTN1-004 | 3125 | 627aa | ENSP00000448653.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58225 | F8VQW3 F8VUI8 F8VUI9 F8VX96 Q12860 | NM_001256064.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000547702.1 | CNTN1-003 | 3033 | 627aa | ENSP00000448004.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58225 | F8VQW3 F8VUI8 F8VUI9 F8VX96 Q12860 | NM_001256063.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000360099.3 | CNTN1-202 | 1963 | 627aa | ENSP00000353213.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58225 | F8VQW3 F8VUI8 F8VUI9 F8VX96 Q12860 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000552913.1 | CNTN1-006 | 572 | 72aa | ENSP00000449706.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VQW3 F8VX96 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000551424.1 | CNTN1-005 | 555 | 62aa | ENSP00000450412.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VQW3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000548005.1 | CNTN1-008 | 553 | 85aa | ENSP00000447862.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VQW3 F8VUI8 F8VX96 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000552248.1 | CNTN1-007 | 463 | 90aa | ENSP00000447860.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VQW3 F8VUI8 F8VUI9 F8VX96 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000548481.1 | CNTN1-010 | 512 | 57aa | ENSP00000449517.1 | Nonsense mediated decay | H0YIJ1 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000550305.1 | CNTN1-009 | 731 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - |
