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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TCF7L1 ENSG00000152284

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Description

transcription factor 7-like 1 (T-cell specific, HMG-box) [Source:HGNC Symbol;Acc:11640]

Gene Synonyms

TCF-3, TCF3

Location

Chromosome 2: 85,360,533-85,537,511 forward strand.

GRCh37:CM000664.1

About this gene

This gene has 4 transcripts (splice variants) and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000282111.3	TCF7L1-001	2968	588aa	ENSP00000282111.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1971	C9JPE3 Q53T87 Q9HCS4	NM_031283.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000442813.1	TCF7L1-004	559	28aa	ENSP00000388984.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JPE3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000494519.1	TCF7L1-002	537	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490744.1	TCF7L1-003	715	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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