Description
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2 [Source:HGNC Symbol;Acc:11105]
Gene Synonyms
BAF170, CRACC2, Rsc8
Location
Chromosome 12: 56,556,767-56,583,351 reverse strand.
GRCh37:CM000674.1
About this gene
This gene has 15 transcripts (splice variants), 1 paralogue and is associated with 3 phenotypes.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000267064.4 | SMARCC2-001 | 4076 | 1214aa | ENSP00000267064.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8907 | F8VZW6 Q8TAQ2 | NM_003075.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000394023.3 | SMARCC2-003 | 4271 | 1152aa | ENSP00000377591.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55835 | F8VZW6 Q8TAQ2 | NM_001130420.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000550164.1 | SMARCC2-006 | 4114 | 1245aa | ENSP00000449396.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F8VXC8 F8VZW6 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000347471.4 | SMARCC2-002 | 3839 | 1130aa | ENSP00000302919.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS8908 | F8VZW6 Q8TAQ2 | NM_139067.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000552674.1 | SMARCC2-004 | 3730 | 105aa | ENSP00000447680.1 | Nonsense mediated decay | F8VZW6 | - | - | |
| ENST00000550519.1 | SMARCC2-009 | 789 | 105aa | ENSP00000449429.1 | Nonsense mediated decay | F8VZW6 | - | - | |
| ENST00000550859.1 | SMARCC2-010 | 656 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000549209.1 | SMARCC2-016 | 439 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000550150.1 | SMARCC2-005 | 3244 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000548130.1 | SMARCC2-014 | 1238 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000549757.1 | SMARCC2-011 | 1062 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000547356.1 | SMARCC2-007 | 741 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000552931.1 | SMARCC2-015 | 608 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000552566.1 | SMARCC2-013 | 534 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000552627.1 | SMARCC2-008 | 409 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
