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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SMYD1 ENSG00000115593

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Description

SET and MYND domain containing 1 [Source:HGNC Symbol;Acc:20986]

Gene Synonyms

BOP, KMT3D, ZMYND18, ZMYND22

Location

Chromosome 2: 88,367,299-88,412,906 forward strand.

GRCh37:CM000664.1

About this gene

This gene has 4 transcripts (splice variants) and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000419482.2	SMYD1-001	4433	490aa	ENSP00000393453.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33240	Q5GJ33 Q8NB12	NM_198274.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000444564.2	SMYD1-002	1816	477aa	ENSP00000407888.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PHG3 Q5GJ32	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000438570.1	SMYD1-003	680	103aa	ENSP00000387482.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JUP3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000468008.1	SMYD1-004	572	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

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Summary

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