Description
fragile X mental retardation, autosomal homolog 1 [Source:HGNC Symbol;Acc:4023]
Gene Synonyms
FXR1P
Location
Chromosome 3: 180,585,929-180,700,541 forward strand.
GRCh37:CM000665.1
About this gene
This gene has 22 transcripts (splice variants), 2 paralogues and is associated with 1 phenotype.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000357559.4 | FXR1-001 | 8711 | 621aa | ENSP00000350170.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS3238 | C9IZ22 C9J5B4 C9JY20 C9JZE0 P51114 | NM_005087.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000305586.7 | FXR1-007 | 3277 | 536aa | ENSP00000307633.7 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS33894 | C9IZ22 C9J5B4 C9JY20 C9JZE0 P51114 | NM_001013439.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000445140.2 | FXR1-005 | 2651 | 539aa | ENSP00000388828.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS46965 | C9IZ22 C9J5B4 C9JY20 C9JZE0 E7EU85 P51114 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000480918.1 | FXR1-008 | 1996 | 608aa | ENSP00000418097.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B4DXZ6 C9IZ22 C9J5B4 C9JY20 C9JZE0 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000468861.1 | FXR1-004 | 1989 | 454aa | ENSP00000420515.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9IZ22 C9J5B4 C9JY20 C9JZE0 E7EU85 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000491062.1 | FXR1-003 | 1768 | 490aa | ENSP00000420643.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9IZ22 C9J5B4 C9JY20 C9JZE0 E7EU85 E9PFF5 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000484958.1 | FXR1-011 | 824 | 123aa | ENSP00000419933.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9IZ22 C9J5B4 C9JY20 C9JZE0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000482125.1 | FXR1-019 | 739 | 246aa | ENSP00000418027.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000465551.1 | FXR1-013 | 572 | 94aa | ENSP00000418724.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9IZ22 C9J5B4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000484790.1 | FXR1-014 | 571 | 75aa | ENSP00000417125.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9J5B4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000469882.1 | FXR1-015 | 570 | 119aa | ENSP00000419793.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9IZ22 C9J5B4 C9JZE0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000484042.1 | FXR1-012 | 562 | 151aa | ENSP00000417513.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | C9JAJ4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000491674.1 | FXR1-009 | 365 | 19aa | ENSP00000419047.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000475315.1 | FXR1-002 | 2341 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000472339.1 | FXR1-006 | 2130 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000476672.1 | FXR1-018 | 976 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000481383.1 | FXR1-022 | 909 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000498658.1 | FXR1-017 | 683 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000461044.1 | FXR1-016 | 601 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000479176.1 | FXR1-010 | 541 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000473375.1 | FXR1-021 | 483 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000461801.1 | FXR1-020 | 410 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
