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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: USP46 ENSG00000109189

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Description

ubiquitin specific peptidase 46 [Source:HGNC Symbol;Acc:20075]

Gene Synonyms

FLJ12552

Location

Chromosome 4: 53,457,138-53,525,502 reverse strand.

GRCh37:CM000666.1

About this gene

This gene has 9 transcripts (splice variants) and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000441222.3	USP46-001	7954	366aa	ENSP00000407818.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47053	P62068	NM_022832.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000451218.2	USP46-003	4622	339aa	ENSP00000390102.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BZK6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000508499.1	USP46-005	1419	359aa	ENSP00000423244.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47054	P62068	NM_001134223.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000503060.1	USP46-004	2437	40aa	ENSP00000422018.1	Nonsense mediated decay		D6R9Z4	-	-
ENST00000514536.1	USP46-002	1589	40aa	ENSP00000426970.1	Nonsense mediated decay		D6R9Z4	-	-
ENST00000512656.1	USP46-008	467	56aa	ENSP00000425806.1	Nonsense mediated decay		D6RIX7	-	-
ENST00000504078.1	USP46-006	573	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000506707.1	USP46-007	536	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000502443.1	USP46-009	572	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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