Description
protein tyrosine phosphatase, receptor type, S [Source:HGNC Symbol;Acc:9681]
Gene Synonyms
PTPSIGMA
Location
Chromosome 19: 5,158,506-5,340,814 reverse strand.
GRCh37:CM000681.1
About this gene
This gene has 13 transcripts (splice variants) and 11 paralogues.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000357368.4 | PTPRS-204 | 7347 | 1948aa | ENSP00000349932.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS45930 | K7ERX4 K7ESP0 Q13332 | NM_002850.3 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000372412.4 | PTPRS-205 | 7350 | 1949aa | ENSP00000361489.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PDC5 K7ERX4 K7ESP0 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000262963.6 | PTPRS-201 | 7287 | 1928aa | ENSP00000262963.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | G8JL96 K7ERX4 K7ESP0 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000348075.2 | PTPRS-202 | 7233 | 1910aa | ENSP00000269907.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS12140 | K7ERX4 K7ESP0 Q13332 | NM_130854.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000587303.1 | PTPRS-002 | 6353 | 1948aa | ENSP00000467537.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS45930 | K7ERX4 K7ESP0 Q13332 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000353284.2 | PTPRS-203 | 6006 | 1501aa | ENSP00000327313.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS12139 | K7ERX4 K7ESP0 Q13332 | NM_130855.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000588012.1 | PTPRS-003 | 5993 | 1910aa | ENSP00000465443.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS12140 | K7ERX4 K7ESP0 Q13332 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000592099.1 | PTPRS-001 | 4766 | 1501aa | ENSP00000467398.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS12139 | K7ERX4 K7ESP0 Q13332 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000590509.1 | PTPRS-005 | 893 | 128aa | ENSP00000465185.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7ERX4 K7ESP0 Q8NHS7 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000591760.1 | PTPRS-006 | 478 | 90aa | ENSP00000468803.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7ERX4 K7ESP0 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000586065.1 | PTPRS-007 | 388 | 79aa | ENSP00000468455.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | K7ERX4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000588552.1 | PTPRS-004 | 5443 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000589851.1 | PTPRS-008 | 1270 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
