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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TBC1D1 ENSG00000065882

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Description

TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1 [Source:HGNC Symbol;Acc:11578]

Gene Synonyms

KIAA1108, TBC, TBC1

Location

Chromosome 4: 37,892,708-38,140,796 forward strand.

GRCh37:CM000666.1

About this gene

This gene has 18 transcripts (splice variants) and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000261439.4	TBC1D1-001	5700	1168aa	ENSP00000261439.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33972	A0JNU9 B9A6J6 H0Y8P0 Q6PJJ8 Q7Z6H2 Q86TI0 Q8NC59	NM_015173.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000508802.1	TBC1D1-009	4119	1159aa	ENSP00000423651.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58897	H0Y8P0 Q86TI0	NM_001253912.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000446803.2	TBC1D1-006	1987	599aa	ENSP00000396877.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JIE2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000402522.1	TBC1D1-002	1567	144aa	ENSP00000383994.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MCJ2 H0Y8P0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000443855.1	TBC1D1-008	755	252aa	ENSP00000397640.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000421339.2	TBC1D1-019	679	226aa	ENSP00000410167.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C380	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000513936.2	TBC1D1-018	530	177aa	ENSP00000425655.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000510573.2	TBC1D1-016	3370	103aa	ENSP00000421641.2	Nonsense mediated decay		H0Y8P0	-	-
ENST00000407365.1	TBC1D1-003	2990	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000401554.1	TBC1D1-004	1713	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000406664.1	TBC1D1-005	992	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469803.1	TBC1D1-010	627	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000509761.1	TBC1D1-017	580	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000405444.3	TBC1D1-012	566	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492180.1	TBC1D1-013	613	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475531.1	TBC1D1-011	608	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000511238.1	TBC1D1-020	572	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000491553.1	TBC1D1-007	455	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

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Summary

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