Description
cold shock domain containing E1, RNA-binding [Source:HGNC Symbol;Acc:29905]
Gene Synonyms
D1S155E, KIAA0885, NRU, RP5-1000E10.3, UNR
Location
Chromosome 1: 115,259,534-115,301,297 reverse strand.
GRCh37:CM000663.1
About this gene
This gene has 17 transcripts (splice variants) and is associated with 1 phenotype.
Transcripts
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000438362.2 | CSDE1-008 | 4167 | 844aa | ENSP00000407724.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS55626 | E9PKN4 E9PLD4 G5E9Q2 Q9UG93 | NM_001242891.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000358528.4 | CSDE1-002 | 4076 | 798aa | ENSP00000351329.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS30812 | E9PKN4 E9PLD4 O75534 Q9UG93 | NM_001007553.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000339438.6 | CSDE1-001 | 4006 | 767aa | ENSP00000342408.6 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS30811 | E9PJK7 E9PKN4 E9PLD4 E9PLT0 E9PNG3 O75534 Q9UG93 | NM_007158.5 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000369530.1 | CSDE1-004 | 3774 | 813aa | ENSP00000358543.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS44197 | E9PJK7 E9PKN4 E9PLD4 E9PLT0 E9PNG3 O75534 Q9UG93 | NM_001130523.2 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000530886.1 | CSDE1-007 | 3459 | 668aa | ENSP00000431297.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PJK7 E9PLT0 E9PNG3 Q9UG93 | - | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, | |
| ENST00000261443.5 | CSDE1-003 | 3228 | 767aa | ENSP00000261443.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS30811 | E9PJK7 E9PKN4 E9PLD4 E9PLT0 E9PNG3 O75534 Q9UG93 | NM_001242893.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000534699.1 | CSDE1-009 | 2667 | 798aa | ENSP00000432958.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS30812 | E9PKN4 E9PLD4 O75534 Q9UG93 | NM_001242892.1 | The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, |
| ENST00000525878.1 | CSDE1-010 | 626 | 46aa | ENSP00000431562.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PKN4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000534389.1 | CSDE1-016 | 601 | 94aa | ENSP00000435185.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PKN4 E9PLD4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000529046.1 | CSDE1-014 | 571 | 136aa | ENSP00000437159.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PJK7 E9PNG3 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000525132.1 | CSDE1-015 | 521 | 36aa | ENSP00000431770.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | E9PJK7 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000525970.1 | CSDE1-013 | 503 | 7aa | ENSP00000432805.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000483407.1 | CSDE1-005 | 741 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000524652.1 | CSDE1-011 | 562 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000533818.1 | CSDE1-012 | 552 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000483030.1 | CSDE1-006 | 873 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - | |
| ENST00000530784.1 | CSDE1-017 | 545 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |
